Validation (based on tumour percentage)

## 
##  Pearson's product-moment correlation
## 
## data:  complete$gt_perTumor and complete$percentage_cancer
## t = 8.7954, df = 204, p-value = 6.016e-16
## alternative hypothesis: true correlation is not equal to 0
## 95 percent confidence interval:
##  0.4175849 0.6168401
## sample estimates:
##       cor 
## 0.5243537

Tumour purity

## 
##  Pearson's product-moment correlation
## 
## data:  merged_purity$Purity.bioinformatic.solution and merged_purity$percentage_cancer
## t = 5.5183, df = 203, p-value = 1.036e-07
## alternative hypothesis: true correlation is not equal to 0
## 95 percent confidence interval:
##  0.2358044 0.4747092
## sample estimates:
##       cor 
## 0.3611688

Immune percentage

## 
##  Pearson's product-moment correlation
## 
## data:  mergedComplete$ImmunePer and mergedComplete$percentage_lymphocyte
## t = 1.5076, df = 44, p-value = 0.1388
## alternative hypothesis: true correlation is not equal to 0
## 95 percent confidence interval:
##  -0.07338819  0.48098353
## sample estimates:
##       cor 
## 0.2216316

TIL score

## 
##  Pearson's product-moment correlation
## 
## data:  mergedComplete$ai_til and mergedComplete$sTIL.score
## t = 3.4674, df = 44, p-value = 0.001186
## alternative hypothesis: true correlation is not equal to 0
## 95 percent confidence interval:
##  0.1998300 0.6642262
## sample estimates:
##       cor 
## 0.4632545